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Papers from 2014

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Niche differentiation of ammonia-oxidising archaea (AOA) and bacteria (AOB) in response to paper and pulp mill effluent, G CJ Abell, D J. Ross, J Keane, B H. Holmes, S S. Robert, M J. Keough, Bradley D. Eyre, and J K. Volkman

2014 Microbiology of Aquatic Systems 67:4 758-768.

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Drivers of pCO2 variability in two contrasting coral reef lagoons: the influence of submarine groundwater discharge, Tyler Cyronak, Isaac R. Santos, Dirk V. Erler, Damien T. Maher, and Bradley D. Eyre

2014 Global Biogeochemical Cycles 28:4 398-414.

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Effects of environmental factors on dimethylated sulfur compounds and their potential role in the antioxidant system of the coral holobiont, Elisabeth SM Deschaseaux, Graham B. Jones, Myrna A. Deseo, Kellie M. Shepherd, R P. Kiene, H B. Swan, Peter Lynton Harrison, and Bradley D. Eyre

2014 Limnology and Oceanography 59:3 758-768.

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Comparative response of DMS and DMSP concentrations in Symbiodinium clades C1 and D1 under thermal stress, Elisabeth Suzanne Marie Deschaseaux, V H. Beltran, Graham B. Jones, Myrna A. Deseo, H B. Swan, Peter Lynton Harrison, and Bradley D. Eyre

2014 Journal of Experimental Marine Biology and Ecology 459 181-189.

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Inorganic nitrogen transformations within permeable carbonate sands, Dirk V. Erler, Isaac R. Santos, and Bradley D. Eyre

2014 Continental Shelf Research 77 69-80.

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Nitrogen transformations within a tropical subterranean estuary, Dirk V. Erler, Isaac R. Santos, Ying Zhang, Douglas R. Tait, Kevin M. Befus, Alicia Hidden, Ling Li, and Bradley D. Eyre

2014 Marine Chemistry 164 38-47.

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Thermal tolerance of early development in tropical and temperate sea urchins: inferences for the tropicalization of eastern Australia, Natasha A. Hardy, Miles Lamare, Sven Uthicke, Kennedy Wolfe, Steve Doo, Symon A. Dworjanyn, and Maria Byrne

2014 Marine Biology 161:2 395-409.

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Hydrologic fragmentation-induced eutrophication in Dove Sound, Upper Florida Keys, USA, Thomas S. Harmon, Joseph M. Smoak, Matthew N. Waters, and Christian J. Sanders

2014 Environmental Earth Sciences 71:10 4387-4395.

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Larvae of the coral eating crown-of-thorns starfish, Acanthaster planci in a warmer-high CO2 ocean, Pamela Z. Kamya, Symon A. Dworjanyn, Natasha Hardy, Benjamin Mos, Sven Uthicke, and Maria Byrne

2014 Global Change Biology 20:11.

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Ingestion of microplastic has limited impact on a marine larva, Katrina L. Kaposi, Benjamin Mos, Brendan P. Kelaher, and Symon A. Dworjanyn

2014 Environmental Science and Technology 48:3 1638-1645.

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The influence of gummy sharks Mustelus antarcticus on observed fish assemblage structure, J Klages, A Broad, Brendan P. Kelaher, and A R. Davis

2014 Environmental Biology of Fishes 97:2 215-222.

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Restoring seaweeds: does the declining fucoid Phyllospora comosa support different biodiversity than other habitats?, E M. Marzinelli, A H. Campbell, A Vergés, M A. Coleman, Brendan P. Kelaher, and P D. Steinberg

2014 Journal of Applied Phycology 26:2 1089-1096.

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Transformation and fate of microphytobenthos carbon in subtropical, intertidal sediments: potential for long-term carbon retention revealed by 13C-labeling, Joanne M. Oakes and Bradley D. Eyre

2014 Biogeosciences 11:7 1927-1940.

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Ocean-atmosphere exchange of organic carbon and CO2 surrounding the Antarctic Peninsula, Sergio Ruiz-Halpern, M LI Calleja, J Dachs, S Del Vento, M Pastor, M Palmer, S Agusti, and C M. Duarte

2014 Biogeosciences 11 2755-2770.

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Elevated rates of organic carbon, nitrogen, and phosphorus accumulation in a highly impacted mangrove wetland, Christian J. Sanders, Bradley D. Eyre, Isaac R. Santos, Wilson Machado, Wanilson Luiz-Silva, Joseph M. Smoak, Joshua L. Breithaupt, Michael E. Ketterer, Luciana Sanders, Humberto Marotta, and Emmanoel Silva-Fiho

2014 Geophysical Research Letters 41:7 2475-2480.

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The influence of groundwater inputs and age on nutrient dynamics in a coral reef lagoon, Douglas R. Tait, Dirk V. Erler, Isaac R. Santos, Tyler Cyronak, Uwe Morgenstern, and Bradley D. Eyre

2014 Marine Chemistry 166 36-47.

Papers from 2013

Nitrifying and denitrifying microbial communities and their relationship to nutrient fluxes and sediment geochemistry in the Derwent Estuary Tasmania, G CJ Abell, D J. Ross, J P. Keane, Joanne M. Oakes, Bradley D. Eyre, S S. Robert, and J K. Volkman

2013 Aquatic Microbial Ecology 70 63-75.

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High tolerance of microzooplankton to ocean acidification in an Arctic coastal planktoncommunity, N Aberle, Kai G. Schulz, A Stuhr, A M. Malzahn, A Ludwig, and U Riebesell

2013 Biogeosciences 10 1471-1481.

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Carbon dioxide dynamics driven by groundwater discharge in a coastal floodplain creek, Marnie L. Atkins, Isaac R. Santos, Sergio Ruiz-Halpern, and Damien T. Maher

2013 Journal of Hydrology 493 30-42.

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Dissecting the impact of CO2 and pH on the mechanisms of photosynthesis and calcification in the coccolithophore Emiliania huxleyi, Lennart T. Bach, Luke C. Mackinder, Kai G. Schulz, Glen Wheeler, Declan C. Schroeder, Colin Brownlee, and Ulf Riebesell

2013 New Phytologist 199 121-134.

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Influence of a burrowing, metal-tolerant polychaete on benthic metabolism, denitrification and nitrogen regeneration in contaminated estuarine sediments, Joanne L. Banks, D Jeff Ross, Michael J. Keough, Catriona K. Macleod, John Keane, and Bradley D. Eyre

2013 Marine Pollution Bulletin 68:1-2 30-37.

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Heat transport dynamics at a sandy intertidal zone, Kevin M. Befus, M B. Cardenas, Dirk V. Erler, Isaac R. Santos, and Bradley D. Eyre

2013 Water Resources Research 49:6 3770-3786.

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Replacement of native seagrass with invasive algal detritus: impacts to estuarine sediment communities, Melanie J. Bishop and Brendan P. Kelaher

2013 Biological Invasions 15:1 45-59.

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Context-specific effects of the identity of detrital mixtures on invertebrate communities, M J. Bishop and Brendan P. Kelaher

2013 Ecology and Evolution 30:11 3986-3999.

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Ocean warming will mitigate the effects of acidification on calcifying sea urchin larvae (Heliocidaris tuberculata) from the Australian global warming hot spot, Maria Byrne, Shawna Foo, Natalie A. Soars, Kennedy DL Wolfe, Hong D. Nguyen, Natasha Hardy, and Symon A. Dworjanyn

2013 Journal of Experimental Marine Biology and Ecology 448 250-257.

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The stunting effect of a high CO2 ocean on calcification and development in sea urchin larvae a synthesis from the tropics to the poles, Maria Byrne, Miles Lamare, David Winter, Symon A. Dworjanyn, and Sven Uthicke

2013 Philosophical Transactions of The Royal Society: B Biological Sciences 368:1627.

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Integration of analytical instruments with computer scripting, Matheus Carvalho de Carvalho

2013 Journal of Laboratory Automation 18:4 328-333.

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Isótopos estáveis aplocados à medição da produção primária em ecossistemas aquáticos, Matheus Carvalho de Carvalho

2013 Oecologia Australis 17:2 195-204.

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A low cost, easy to build, portable, and universal autosampler for liquids, Matheus Carvalho de Carvalho and Bradley D. Eyre

2013 Methods in Oceanography 8 23-32.

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Conservation benefits of a network of marine reserves and partially protected areas, Melinda Coleman, A Palmer-Brodie, and Brendan P. Kelaher

2013 Biological Conservation 167 257-264.

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Groundwater and porewater as a major source of alkalinity to a fringing coral reef lagoon (Muri Lagoon, Cook Islands), Tyler Cyronak, Isaac R. Santos, Dirk V. Erler, and Bradley D. Eyre

2013 Biogeosciences 10 2467-2480.

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Permeable coral reef sediment dissolution driven by elevated pCO2 and pore water advection, Tyler Cyronak, Isaac R. Santos, and Bradley D. Eyre

2013 Geophysical Research Letters 40:18 4876-4881.

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Carbon cycling hysteresis in permeable carbonate sands over a diurnal cycle: implications for ocean acidification, Tyler Cyronak, Isaac R. Santos, Ashly McMahon, and Bradley D. Eyre

2013 Limnology and Oceanography 58:1 131-143.

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The determination of enclosed water volume in large flexible-wall mesocosms 'KOSMOS', J Czerny, Kai G. Schulz, S A. Krug, A Ludwig, and U Riebesell

2013 Biogeosciences 10 1937-1941.

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A simple method for air/sea gas exchange measurement in mesocosms and its application in carbon budgeting, J Czerny, Kai G. Schulz, A Ludwig, and U Riebesell

2013 Biogeosciences 9 11989-12017.

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Polychaete richness and abundance enhanced in anthropogenically modified estuaries despite high concentrations of toxic contaminants, Katherine A. Dafforn, Brendan P. Kelaher, Stuart L. Simpson, Melinda A. Coleman, Pat A. Hutchings, Graeme F. Clark, Nathan A. Knott, Martina A. Doblin, and Emma L. Johnston

2013 Plos One 8:9.

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Complex responses of intertidal molluscan embryos to a warming and acidifying ocean in the presence of UV radiation, Andrew R. Davis, Daniel Coleman, Allison Broad, Maria Byrne, Symon Dworjanyn, and Rachel Przeslawski

2013 Plos One 8:2 2-e55939.

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A 13C labelling study on carbon fluxes in Arctic plankton communities under elevated CO2 levels, A de Kluijver, K Soetaert, J Czerny, Kai G. Schulz, T Boxhammer, U Riebesell, and J J. Middelburg

2013 Biogeosciences 10 1425-1440.

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Air blasting as the optimal approach for the extraction of antioxidants in coral tissue, Elisabeth SM Deschaseaux, Myrna A. Deseo, Kellie M. Shepherd, Graham B. Jones, and Peter Lynton Harrison

2013 Journal of Experimental Marine Biology and Ecology 448 146-148.

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Seasonal variation in the effects of ocean warming and acidification on a native bryozoan, Celleporaria nodulosa, Halley MS Durrant, Graeme F. Clark, Symon A. Dworjanyn, Maria Byrne, and Emma L. Johnston

2013 Marine Biology 160:8 1903-1911.

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CO2 increases 14C-primary production in an Arctic plankton community, A Engel, C Borchard, J Piontek, Kai G. Schulz, U Riebesell, and R Bellerby

2013 Biogeosciences 9 10285-10330.

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Denitrification, anammox and nitrate reduction in the sediments of the Southern Great Barrier Reef Lagoon, Dirk V. Erler, Lindsay A. Trott, Daniel M. Alongi, and Bradley D. Eyre

2013 Marine Ecology Progress Series 478 57-70.

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Quantity and quality of organic matter (detritus) drives N2 effluxes (net denitrification) across seasons, benthic habitats, and estuaries, Bradley D. Eyre, Damien T. Maher, and Peter Squire

2013 Global Biogeochemical Cycles 27:4 1083-1095.

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Seasonal, daily and diel N2 effluxes in permeable carbonate sediments, Bradley D. Eyre, Isaac R. Santos, and Damien T. Maher

2013 Biogeosciences 10 2601-2615.

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Interaction of benthic microalgae and macrofauna in the control of benthic metabolism, nutrient fluxes and denitrification in a shallow sub-tropical coastal embayment (western Moreton Bay, Australia), Angus JP Ferguson and Bradley D. Eyre

2013 Biogeochemistry 112:1-3 423-440.

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Groundwater-surface water exchange in a mangrove tidal creek: evidence from natural geochemical tracers and implications for nutrient budgets, Justin Gleeson, Isaac R. Santos, Damien T. Maher, and Lindsay Golsby-Smith

2013 Marine 156 27-37.

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Detrital diversity influences estuarine ecosystem performance, Brendan P. Kelaher, Melanie J. Bishop, Jamie Potts, Peter Scanes, and Greg Skilbeck

2013 Global Change Biology 19:6 1909-1918.

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Positive responses of a seagrass ecosystem to experimental nutrient enrichment, Brendan P. Kelaher, James Van Den Broek, Paul H. York, Melanie J. Bishop, and David J. Booth

2013 Marine Ecology Progress Series 487 15-25.

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Groundwater-derived dissolved inorganic and organic carbon exports from a mangrove tidal creek: the missing mangrove carbon sink?, Damien T. Maher, Isaac R. Santos, L Golsby-Smith, J Gleeson, and Bradley D. Eyre

2013 Limnology and Oceanography 58:2 475-488.

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Hysteresis between coral reef calcification and the seawater aragonite saturation state, Ashly McMahon, Isaac R. Santos, Tyler Cyronak, and Bradley D. Eyre

2013 Geophysical Research Letters 40:17 4675-4679.