Title

grainSAGE - A database system for the management and analysis of SAGE tag sequences

Document Type

Conference publication

Publication details

Cordeiro, GM, Barbary, D, Bundock, PC & Henry, RJ 2005, 'grainSAGE - A database system for the management and analysis of SAGE tag sequences', in HV Jagadish (ed.), Proceedings of the 13th international conference on intelligent systems for molecular biology, Dertoit, Michigan, USA, 25-29 June, Oxford University Press, Oxford, UK.

Abstract

We have developed grainSAGE, a data warehousing facility to store and analyse large sample sets of tag sequences derived from Serial Analysis of Gene Expression (SAGE) for wheat and barley grain. Expression profiles of specific tag sequences across multiple time point libraries are visualised graphically with SWF.

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