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Papers from 2008

Towards universal loci for plant genotyping, Toni Pacey

2008 Plant genotyping II: SNP technology 195-206.

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Multiplexed high-throughput barley variety identification, Julie Pattemore and Robert J. Henry

2008 10th International Barley Genetics Symposium (IBGS).

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Sequenom MassARRAY® iPLEX™ Gold SNP genotyping for high throughput variety identification, Julie Pattemore and Robert J. Henry

2008 International Plant and Animal Genome XVI Conference, Sequenome Workshop,.

Nanotechnology: the future of cost-effective plant genotyping, Julie Pattemore, M Trau, and Robert J. Henry

2008 Plant Genotyping II: SNP Technology 133-153.

Sugarcane molasses – a potential source of anti-diabetic compounds, D N. Payne, R P. Taylor, Myrna A. Deseo, M G. O'Shea, N P. Masel, and David N. Leach

2008 Australian Society of Sugar Cane Technologists (ASSCT) Conference.

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Doubled haploids, markers and QTL analysis in vegetable brassicas, D Pink, L Bailey, S McClement, P Hand, E Mathas, V Buchanan-Wollaston, D Astley, G J. King, and G Teakle

2008 Euphytica 164:2 509-514.

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Direct NMR analysis of cannabis water extracts and tinctures and semi-quantitative data on THC and THC-acid, M Politi, W Peschel, N Wilson, M Zloh, J M. Prieto, and Michael Heinrich

2008 Phytochemistry 69:2 562-570.

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The high affinity K+ transporter AtHAK5 plays a physiological role in planta at very low K+ concentrations and provides a caesium uptake pathway in Arabidopsis, Zhi Qi, Corrina R. Hampton, Ryoung Shin, Bronwyn J. Barkla, Philip J. White, and Daniel P. Schachtman

2008 Journal of Experimental Botany 59:3 595-607.

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Influence of prior land use on wood quality of Pinus radiata in New South Wales, Australia, Carolyn A. Raymond

2008 Forest Ecology and Management 255:7 2626-2633.

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Effect of thinning on relationships between three measures of wood stiffness in Pinus radiata: standing trees vs. logs vs. short clear specimens, Carolyn A. Raymond, Bill Joe, Dean W. Anderson, and Duncan J. Watt

2008 Canadian Journal of Forest Research 38:11 2870-2879.

Matching soil P and K supply with P and K demand of canola in Western Australia, Z Rengel, Q Ma, and Terry J. Rose

2008 Agribusiness Crop Updates 2008.

DNA repository for wild rice relatives, Nicole F. Rice, G Good, and Robert J. Henry

2008 1st Australian Wild Rice Symposium: Australia, a major centre of diversity for rice.

DNA banks as a resource for SNP genotyping, Nicole F. Rice, Shabana Kasem, and Robert J. Henry

2008 Plant genotyping II: SNP technology 207-218.

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Post-flowering supply of P, but not K, is required for maximum canola seed yields, Terry J. Rose, Zed Rengel, Qifu Ma, and John W. Bowden

2008 European Journal of Agronomy 28:3 371-379.

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Hydraulic lift by canola plants aids P and K uptake from dry topsoil, Terry J. Rose, Z Rengel, Q Ma, and JW Bowden

2008 Australian Journal of Agricultural Research 59:1 38-45.

Genetics and epigenetics of fruit development and ripening, Graham Seymour, Mervin Poole, Kenneth Manning, and Graham J. King

2008 Current Opinion in Plant Biology 11:1 58-63.

Accelerated domestication of Australian native grasses, Frances M. Shapter and Robert J. Henry

2008 Native Grasses Workshop.

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Domestication of Australian grasses, Frances M. Shapter, Robert J. Henry, Sylvia Malory, and Ian Chivers

2008 Harlan II. An International Symposium Biodiversity in agricultue: domestication, evolution, & sustainability.

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Domestication of Australian grasses as bioenergy crops, Frances M. Shapter, Robert J. Henry, Sylvia Malory, and Ian Chivers

2008 6th National Native Grasslands Conference – Regenerative Native Grassland Management for Profitable, Ecological and Social Gains.

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Domestication of Australian grasses as bioenergy crops, Frances M. Shapter, Robert J. Henry, Sylvia Malory, and Ian Chivers

2008 Bioenergy Australia - Sustainable Bioenergy Opportunities for Australia.

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Domestication of Australian grasses as bioenergy crops, Frances M. Shapter, Robert J. Henry, Sylvia Malory, and Ian Chivers

2008 ASPB Pan American Congress on Plants & Bioenergy.

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Endosperm and starch granule morphology in wild cereal relatives, Frances M. Shapter, L Slade Lee, and Robert J. Henry

2008 Plant Genetic Resources 6 85-97.

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Accelerated domestication of Australian grasses as new sustainable food and fodder crops, Frances M. Shapter, Sylvia Malory, Ian Chivers, and Robert J. Henry

2008 58th Australian Cereal Chemistry Conference.

Australian wild rice: an opportunity to develop new sustainable food crops, Frances M. Shapter, Sylvia Malory, Ian Chivers, and Robert J. Henry

2008 1st Australian Wild Rice Symposium: Australia, a major centre of diversity for rice.

GC analysis of aqueous plant extracts, K M. Shepherd, V CF Westbrooke, and Myrna A. Deseo

2008 RACI Natural Products Group One Day Symposium.

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Genetic structuring in the spotted gum complex (genus Corymbia, section Politaria), Mervyn Shepherd, Shabana Kasem, Gary A. Ablett, Joel W. Ochieng, and Allison C. Crawford

2008 Australian Systematic Botany 21:1 15-25.

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Mapping species differences for adventitious rooting in a Corymbia torelliana x C. citriodora subspecies variegata hybrid, Mervyn Shepherd, Shabana Kasem, David J. Lee, and Robert J. Henry

2008 Tree Genetics and Genomes 4:4 715-725.

Comparative mapping among subsection Australes (genus Pinus, family Pinaceae), Mervyn Shepherd and Claire G. Williams

2008 Genome 51:5 320-331.

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Comparative assessment of wheat landraces from AWCC, ICARDA and VIR germplasm collections based on the analysis of SSR markers, P Strelchenko, K Street, O Mitrofanova, Helen Hill, Robert J. Henry, and M Mackay

2008 11th International Wheat Genetics Symposium.

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Secondary metabolites from Grevillea robusta, Hao Wang, David N. Leach, Paul I. Forster, and Peter G. Waterman

2008 Biochemical Systematics and Ecology 36:5-6 452-453.

Bisresorcinols and arbutin derivatives from Grevillea banksii R. Br., Hao Wang, David N. Leach, Michael C. Thomas, Stephen J. Blanksby, Paul I. Forster, and Peter G. Waterman

2008 Natural Product Communications 3:1 57-64.

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A functional genomics resource for Brassica napus: development of an EMS mutagenized population and discovery of FAE1 point mutations by TILLING, Nian Wang, Yajie Wang, Fang Tian, Graham J. King, Chunyu Zhang, Yan Long, Lei Shi, and Jinling Meng

2008 New Phytologist 180:4 751-765.

Genotyping by allele specific PCR, Daniel LE Waters, Peter C. Bundock, and Robert J. Henry

2008 Plant genotyping II: SNP technology 88-97.

Oryza sativa breeding and traits that might be sourced from Australian wild rice, Daniel LE Waters and Robert J. Henry

2008 1st Australian Wild Rice Symposium: Australia, a major centre of diversity for rice.

Personalised plant genetic analysis, Daniel LE Waters, Julie A. Pattemore, Peter C. Bundock, Nicole F. Rice, Frances G. Eliott, and Robert J. Henry

2008 58th Australian Cereal Chemistry Conference.

Preliminary investigation into milk flavour, V Westbooke, H Smyth, K Shepherd, Carol A. Morris, B Granzin, and Myrna A. Deseo

2008 10th Scientific Meeting of the Australasian Association for Chemosensory Science (AACSS).

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Differential LongSAGE tag abundance analysis in a barley seed germination time course and validation with relative real-time RT-PCR, Jessica F. White, Toni Pacey-Miller, Peter C. Bundock, and Robert J. Henry

2008 Plant Science 175:5 858-867.

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Dioscorea villosa (wild yam) induces chronic kidney injury via pro-fibrotic pathways, Ken Wojcikowski, Hans Wohlmuth, David W. Johnson, and Glenda Gobe

2008 Food and Chemical Toxicology 46:9 3122-3131.

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Volatile chemical constituents of three Ocimum species (Lamiaceae) from Papua New Guinea (SPJNS), Stewart W. Wossa, Topul Rali, and David N. Leach

2008 The South Pacific Journal of Natural Science 26:1 25-27.

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The Arabidopsis cax3 mutants display altered salt tolerance, pH sensitivity and reduced plasma membrane H+-ATPase activity, Jian Zhao, Bronwyn J. Barkla, Joy Marshall, Jon K. Pittman, and Kendal D. Hirschi

2008 Planta 227:3 659-669.

Papers from 2007

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New pseudan (2-alkyl-4(1H)-quinolinone) alkaloids from Boronia ternata var. elongata and Boronia alulata (Rutaceae), Catherine Agier, Michele Bury, Jacqueline Aquette, Reynald Hocquemiller, and Peter G. Waterman

2007 Natural Product Communications 21:8 698-703.

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Simple sequence repeats reveal uneven distribution of genetic diversity in chloroplast genomes of Brassica oleracea L. and (n=9) wild relatives, C J. Allender, J Allainguillaume, J Lynn, and Graham J. King

2007 Theoretical and Applied Genetics 114:4 609-618.

Steroid hormones in the tear film, Linda K. Banbury, Lakkis C, and Carol A. Morris

2007 Tear Film and Ocular Surfact Society (TFOS) Conference.

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Novel insights into seed fatty acid synthesis and modification pathways from genetic diversity and quantitative trait loci analysis of the Brassica C genome, G C. Barker, T R. Larson, I A. Graham, J R. Lynn, and G J. King

2007 Plant Physiology 144:4 1827-1842.

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Biological sequence data preprocessing for classification: a case study in splice site identification, Abdul KMA Baten, S K. Halgamuge, Bill Chang, and Nalin Wickrmarachchi

2007 Advances in Neural Networks – ISNN 2007: 4th International Symposium on Neural Networks, ISNN 2007: Proceedings, Part II 4492 1221-1230.

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Generation of simple, perfect markers for cereal quality traits, Louis MT Bradbury, Daniel LE Waters, and Robert J. Henry

2007 Plant and Animal Genomes Conference XV, Population and Conservation Genomics workshop.

The value of the Australian nutrition screening initiative for older Australians- results from a national survey, S Brownie, Stephen Myers, and J Stevens

2007 Journal of Nutrition, Health and Aging 11:1 20-25.

Genotyping of single nucleotide polymorphisms in sugarcane using mass spectrometry and CEL I polymorphism detection, Peter C. Bundock, Frances G. Eliott, Giovanni M. Cordeiro, and Robert J. Henry

2007 International Plant and Animal Genome Conference XV, International Consortium of Sugar Biotechnology Workshop.

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A quinolizidine alkaloid O-tigloyltransferase gene in wild and domesticated white lupin (Lupinus albus), Yihua Chen, L Slade Lee, and Robert J. Henry

2007 Annals of Applied Biology 151:3 357-362.

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Taxonomically significant coumarins from three Philotheca species (Rutaceae), Amina Chlouchi, Corinne Girard, Francoise Bevalot, Peter G. Waterman, and Frederic Muyard

2007 Biochemical Systematics and Ecology 35:4 251-254.

Diversity in a plant defense locus in wild barley populations is strongly correlated with water availability, James K. Cronin, Peter C. Bundock, Agnelo Furtado, Robert J. Henry, and Eviatar Nevo

2007 Plant and Animal Genomes Conference XV, Population and Conservation Genomics workshop.

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Adaptive climatic molecular evolution in wild barley at the Isa defense locus, James K. Cronin, Peter C. Bundock, Robert J. Henry, and Eviatar Nevo

2007 Proceedings of the National Academy of Science of the United States of America 104:8 2773-2778.

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Adaptive climatic molecular evolution in wild barley at the Isa defense locus, James K. Cronin, Peter C. Bundock, Robert J. Henry, and Eviatar Nevo

2007 Proceedings of the National Academy of Science of the United States of America 104:8 2773-2778.

A novel detection strategy for scanning multiple mutations using CEL I mismatch cleavage and capillary electrophoresis, Michael J. Cross, Daniel LE Waters, L Slade Lee, and Robert J. Henry

2007 Plant and Animal Genomes XV Conference.

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Sorghum resolved as a distinct genus based on combined ITS1, ndhF and Adh1 analyses, Sally L. Dillon, Peter K. Lawrence, Robert J. Henry, and H James Price

2007 Plant Systematics and Evolution 268:1-4 29-43.

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Domestication to crop improvement: genetic resources for sorghum and saccharum (Andropogoneae), Sally L. Dillon, Frances M. Shapter, Robert J. Henry, Giovanni Cordeiro, Liz Izquierdo, and L Slade Lee

2007 Annals of Botany 100:5 975-989.

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Lack of functional expression of NMDA receptors in PC12 cells, Mark A. Edwards, Rhonda A. Loxley, Andrew J. Williams, Mark Connor, and Jacqueline K. Phillips

2007 NeuroToxicology 28:4 876-885.

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Investigation of the effect of conditioning on the fracture of hard and soft wheat grain by the single-kernel characterization system: a comparison with roller milling, Mark A. Edwards, Brian G. Osborne, and Robert J. Henry

2007 Journal of Cereal Science 46:1 64-74.

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Studies into the genetics of wheat endosperm rheology and microstructure, Mark A. Edwards, Brian G. Osborne, and Robert J. Henry

2007 57th Australian Cereal Chemistry Conference.

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Analysis of BAD gene expression in Oryza sativa using qRTPCR, Timothy L. Fitzgerald, Daniel LE Waters, and Robert J. Henry

2007 Plant and Animal Genomes Conference XV.

Relationship between hardness genes and quality in barley (Hordeum vulgare), Glen P. Fox, Linh Nguyen, Jan GP Bowman, David ME Poulsen, P Andrew Inkerman, and Robert J. Henry

2007 Journal of the Institute of Brewing 113 87-95.

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Measurement of genetic and environmental variation in barley (Hordeum vulgare) grain hardness, Glen P. Fox, Brian G. Osborne, Jan GP Bowman, Alison M. Kelly, Mehmet Cakir, David ME Poulsen, P Andrew Inkerman, and Robert J. Henry

2007 Journal of Cereal Science 46:1 82-92.

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Differential specificity of cereal promoters in homologous and heterologous cereals, Agnelo Furtado, Robert J. Henry, Alessandro Pellegrineschi, Fumio Takaiwa, Carl Ramage, and German Spangenberg

2007 Plant and Animal Genomes Conference XV.

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Fortification of plant folate genes in rice, Susan A. Gillies, Shane R. McIntosh, and Robert J. Henry

2007 Plant and Animal Genomes Conference XV.

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Real-time PCR detection of five different "endogenous control gene" transcripts in forensic autopsy material, Michael Heinrich, S Lutz-Bonengel, K Matt, and U Schmidt

2007 Forensic Science International: Genetics 1:2 163-169.

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Successful RNA extraction from various human postmortem tissues, Michael Heinrich, K Matt, S Lutz-Bonengel, and U Schmidt

2007 International Journal of Legal Medicine 121:2 136-142.

Application of genomics in cereal chemistry, Robert J. Henry

2007 57th Australian Cereal Chemistry Conference.

Genomics as a tool for cereal chemistry, Robert J. Henry

2007 Cereal Chemistry 84:4 365-369.

The use of cereals as biofuels, Robert J. Henry

2007 57th Australian Cereal Chemistry Conference.

Functional analysis of rice genes determining fragrance, Robert J. Henry, Louis MT Bradbury, Timothy L. Fitzgerald, Susan A. Gillies, Nigel Slater, and Daniel LE Waters

2007 5th Rice Functional Genomics Symposium.

Genomics approaches to analysis of genetic adaptation to climate in barley, Robert J. Henry, James K. Cronin, Peter C. Bundock, Agnelo Furtado, and Eviatar Nevo

2007 13th Australian Barley Technical Symposium.

Gene flow and genetic diversity in eucalypt plantations and native forest in north coast New South Wales, Megan E. Jones, Mervyn Shepherd, Robert J. Henry, Spencer Bruskin, and Angela Delves

2007 Wood Breeding, Biotechnology and Industrial Expectations Meeting.

Understanding symptomless growth of Leptosphaeria maculans in Brassica napus (oilseed rape) to manage phoma stem canker, Graham J. King

2007 12th International Rapeseed Congress.

Assessment of cytokine levels in the tears of contact lens wearers and non-contact lens wearers, C Lakkis, S Ames, Paul A. Connellan, Linda K. Banbury, and Carol A. Morris

2007 Tear Film and Ocular Surfact Society (TFOS) Conference.

Biologically active compounds. WO2007062468 Bioactive Exports Pty Ltd., patent, David N. Leach, Lesley M. Stevenson, Brigitte Gabriel, and Karen Beattie

2007.

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Elucidation of danzhixiaoyao wan and its constituent herbs on antioxidant activity and inhibition of nitric oxide production, Hui Liao, Linda K. Banbury, and David N. Leach

2007 Evidence-Based Complementary and Alternative Medicine 4:4 425-430.

Inhibitory effects of 12 hemostatic Chinese herbs on nitric oxide production in LPS-activated RAW264.7 macrophages, Hui Liao, Linda K. Banbury, and David N. Leach

2007 Journal of China Pharmacy 18:9 117-130.

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Alkylamides from echinacea modulate induced immune responses in macrophages, Anita Matthias, Linda K. Banbury, Kerry G. Penman, Lesley M. Stevenson, Kerry M. Bone, David N. Leach, and Reg P. Lehmann

2007 Immunological Investigations 36:2 117-130.

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SAGE of the developing wheat caryopsis, Shane McIntosh, Loraine Watson, Peter C. Bundock, Allison C. Crawford, Jessica F. White, Giovanni M. Cordeiro, Daniel Barbary, Lee Rooke, and Robert J. Henry

2007 Plant Biotechnology Journal 5:1 69-83.

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Cytochrome P450 inhibitory action of echinacea preparations differs widely and co-varies with alkylamide content, M Modarai, J Gertsch, A Suter, Michael Heinrich, and A Kortenkamp

2007 Journal of Pharmacy and Pharmacology 59:4 567-573.

Comparison of cytokine levels in the tears and saliva, Carol A. Morris, Paul A. Connellan, Linda K. Banbury, S Ames, and C Lakkis

2007 Tear Film and Ocular Surfact Society (TFOS) Conference.

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Clerodane diterpenes from the stems of Casearia grewiifolia var. gelonioides (Flacourtiaceae/Salicaceae sensu lato), M Ashik Mosaddik, Paul I. Forster, Ron Booth, and Peter G. Waterman

2007 Biochemical Systematics and Ecology 35:9 631-633.

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Phenolic glycosides from some Australian species of Flacourtiaceae (Salicaceae sensu lato), M Ashik Mosaddik, Paul I. Forster, Ron Booth, and Peter G. Waterman

2007 Biochemical Systematics and Ecology 35:3 166-168.

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Three new 3-benzylbenzofuran-2-one derivatives from Homalium brachybotrys (Flacourtiaceae/Salicaceae s. l.), M Ashik Mosaddik, Paul I. Forster, and Peter G. Waterman

2007 Natural Product Research 21:13 1191-1198.

Effective regulation of complementary medicines, Stephen Myers

2007 Australian Journal of Pharmacy 88:1051 58-59.

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Nuclear ribosomal pseudogenes resolve a corroborated monophyly of the eucalypt genus Corymbia despite misleading hypotheses at functional ITS paralogs, Joel W. Ochieng, Robert J. Henry, Peter R. Baverstock, Dorothy A. Steane, and Mervyn Shepherd

2007 Molecular Phylogenetics & Evolution 44:2 752-764.

Phylogenetics in plant biotechnology: principles, obstacles and oppportunities for the resource poor, Joel W. Ochieng, A WT Muigai, and G N. Ude

2007 African Journal of Biotechnology 6:6 639-649.

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Genetic control of propagation traits in a single Corymbia torelliana x Corymbia variegata family, Joel W. Ochieng, Peter Pomroy, Mark J. Dieters, and David J. Lee

2007 Canadian Journal of Forest Research 37:12 2563-2574.

Microsatellites retain phylogenetic signals across genera in eucalypts (Myrtaceae), Joel W. Ochieng, Dorothy A. Steane, P Y. Ladiges, Peter R. Baverstock, Robert J. Henry, and Mervyn Shepherd

2007 Genetics & Molecular Biology 30:4 1125-1134.

Measurement of barley grain rheology for the quality selection of breeding material, Brian G. Osborne, Glen P. Fox, Alison M. Kelly, and Robert J. Henry

2007 Journal of the Institute of Brewing and Distilling 113:2 135-141.

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Assessment of commercial milling potential of hard wheat by measurement of the rheological properties of whole grain, Brian G. Osborne, Robert J. Henry, and Michael D. Southan

2007 Journal of Cereal Science 45:2 122-127.

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Understanding gene expression in the developing grain, Toni Pacey-Miller, Loraine Watson, Jessica F. White, Shane R. McIntosh, Allison C. Crawford, Peter C. Bundock, Daniel Barbary, Giovanni M. Cordeiro, and Robert J. Henry

2007 57th Australian Cereal Chemistry Conference.

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Rapid malt - the path to faster malting barley, Toni Pacey-Miller, Jessica F. White, Peter C. Bundock, and Robert J. Henry

2007 13th Australian Barley Technical Symposium.

Unlocking the mysteries of malting using SAGE, Toni Pacey-Miller, Jessica F. White, Allison C. Crawford, Giovanni M. Cordeiro, Daniel Barbary, Peter C. Bundock, and Robert J. Henry

2007 International Plant and Animal Genome Conference XV.

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High-throughput genotyping of barley for variety identification, Julie A. Pattemore and Robert J. Henry

2007 13th Australian Barley Technical Symposium.

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High-throughput genotyping of cereals, Julie A. Pattemore and Robert J. Henry

2007 Cereals 2007 : proceedings of 57th Australian Cereal Chemistry Conference.

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Comparative chemical analysis of the essential oil constituents in the bark, heartwood and fruits of Cryptocarya massoy (Oken) Kosterm. (Lauraceae) from Papua New Guinea, Topul Rali, Stewart W. Wossa, and David N. Leach

2007 Molecules 12 149-154.

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Volatile chemical constituents of Piper aduncum L and Piper gibbilimbum C. DC (Piperaceae) from Papua New Guinea, Topul Rali, Stewart W. Wossa, David N. Leach, and Peter G. Waterman

2007 Molecules 12 398-394.

Influence of wood density and fibre length on properties of medium density fibreboard manufactured from Pinus radiata, Carolyn A. Raymond

2007 Appita Journal: Journal of the Technical Association of the Australian and New Zealand Pulp and Paper Industry 60:3 204-208.

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Patterns of basic density variation for Pinus radiata grown in south-west slopes region of New South Wales, Australia, Carolyn A. Raymond and Bill Joe

2007 New Zealand Journal of Forestry Science 37:1 81-95.