Title
Computational data from: "Maximising recombination across macadamia populations to generate linkage maps for genome anchoring"
Chief Investigator
Nock, Catherine
Funders
Hort Innovation
Grant ID
MC15008
Grant Links
School or Research Centre
Centre for Plant Science
Lead Partner Organisation
Southern Cross University
Contact
Dr Catherine Nock
Southern Cross Plant Science
Southern Cross University
PO Box 157 Lismore NSW, 2480 Australia.
Recommended Citation
Langdon, K., King, G.J., Baten, A., Mauleon, R., Bundock, P. C., Topp, B. L. & Nock, C. (2019) Computational data from: "Maximising recombination across macadamia populations to generate linkage maps for genome anchoring". http://dx.doi.org/10.25918/5dc2589924ca2
Description
Computational files associated with the publication Langdon et al. 2020 Maximising recombination across macadamia populations to generate linkage maps for genome anchoring. Scientific Reports.
Data Collection Start Date
2016
Data Collection End Date
2019
Coverage
Macadamia populations from Southern Cross University, Lismore and Queensland Department of Agriculture Maroochy Research Facility, Nambour and Bundaberg Research Facility, Bundaberg, Australia.
Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.
FoR Code
0706
Data Processing
Codominant single nucleotide polymorphism (SNP) and dominant Presence-absence (PAV) markers were identified using the DArT Pty Ltd. genome complexity reduction method. Genetic linkage maps were constructed using JoinMap v5. Visual representations of each map were generated using MapChart v2.3. A complete description of the methods is provided Langdon et al. 2020 Scientific Reports. https://doi:org/10.1038/s41598-020-61708-6
Methodology
Data generated were established by Kirsty S Langdon, Graham J King, Abdul Baten, Ramil Mauleon, Peter C Bundock, Bruce L Topp and Catherine J Nock.
A full description of the methodology is provided in Langdon et al. 2020 Scientific Reports. https://doi:org/10.1038/s41598-020-61708-6