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Papers from 2016

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Distribution and spatial modelling of a soft coral habitat in the Port Stephens–Great Lakes Marine Park: implications for management, Davina E. Poulos, Christopher Gallen, Tom Davis, David J. Booth, and David Harasti

Ecological roles of exploited sea cucumbers, Steven W. Purcell, Chantal Conand, Sven Uthicke, and Maria Byrne

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Rotational zoning systems in multi-species sea cucumber fisheries, Steven W. Purcell, Hampus Eriksson, and Maria Byrne

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Trends in small-scale artisanal fishing of sea cucumbers in Oceania, Steven W. Purcell, Poasi Ngaluafe, Karibanang T. Aram, and Watisoni Lalavanua

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Variation in postharvest processing of sea cucumbers by fishers and commercial processors among three Pacific Island countries, Steven W. Purcell, Poasi Ngaluafe, Karibanang T. Aram, and Watisoni Lalavanua

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Multiple factors affect socioeconomics and wellbeing of artisanal sea cucumber fishers, Steven W. Purcell, Poasi Ngaluafe, Simon J. Foale, Nicole Cocks, Brian R. Cullis, and Watisoni Lalavanua

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Movement and growth of the coral reef holothuroids Bohadschia argus and Thelenota ananas, Steven W. Purcell, Toby P. Piddocke, Steven James Dalton, and You-Gan Wang

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Biometric and reproductive aspects of the pen shell Atrina seminuda (Bivalvia: Pinnidae) in northeastern Venezuela, Maria Salomé Rangel, Jeremy Mendoza, Luis Freites, Alejandro Tagliafico, José Silva, and Natividad Garcia

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Groundwater discharge as a source of dissolved carbon and greenhouse gases in a subtropical estuary, Mahmood Sadat-Noori, Damien T. Maher, and Isaac R. Santos

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Fresh meteoric versus recirculated saline groundwater nutrient inputs into a subtropical estuary, Mahmood Sadat-Noori, Isaac R. Santos, Douglas R. Tait, and Damien T. Maher

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Intermittently Closed and Open Lakes and/or Lagoons (ICOLLs) as groundwater-dominated coastal systems: evidence from seasonal radon observations, Mahmood Sadat-Noori, Isaac R. Santos, Douglas R. Tait, Ashley McMahon, Sean Kadel, and Damien T. Maher

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Are global mangrove carbon stocks driven by rainfall?, Christian J. Sanders, Damien T. Maher, Douglas R. Tait, Darren Williams, Ceylena Holloway, James Z. Sippo, and Isaac R. Santos

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Examining 239+240Pu, 210Pb and historical events to determine carbon, nitrogen and phosphorus burial in mangrove sediments of Moreton Bay, Australia, Christian J. Sanders, Isaac R. Santos, Damien T. Maher, Joshua L. Breithaupt, Joseph M. Smoak, Michael Ketterer, Luciana Sanders, and Bradley D. Eyre

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Cuttlefish perform multiple agonistic displays to communicate a hierarchy of threats, Alexandra K. Schnell, Carolynn L. Smith, Roger T. Hanlon, Karina C. Hall, and Robert Harcourt

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Reef fishes can recognize bleached habitat during settlement: sea anemone bleaching alters anemonefish host selection, Anna Scott and Danielle L. Dixson

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Subtropical anemonefish Amphiprion latezonatus recorded in two additional host sea anemone species, Anna Scott, K JW Rushworth, Steven James Dalton, and Stephen DA Smith

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Global patterns in the effects of predator declines on sea urchins, Hannah Sheppard-Brennand, Symon A. Dworjanyn, and Alistair GB Poore

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Are mangroves drivers or buffers of coastal acidification? Insights from alkalinity and dissolved inorganic carbon export estimates across a latitudinal transect, James Z. Sippo, Damien T. Maher, Douglas R. Tait, Ceylena J. Holloway, and Isaac R. Santos

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Dimethyl sulfide and other biogenic volatile organic compound emissions from branching coral and reef seawater: potential sources of secondary aerosol over the Great Barrier Reef, Hilton B. Swan, Robert W. Crough, Petri Vaattovaara, Bradley D. Eyre, Branka Miljevic, Zoran D. Ristovski, and Graham B. Jones

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Exploitation and reproduction of the bullnose ray (Myliobatis freminvillei) caught in an artisanal fishery in La Pared, Margarita Island, Venezuela, Alejandro Tagliafico, Nicolás Ehemann1, María S. Rangel, and Néstor Rago

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Mangrove pore water exchange across a latitudinal gradient, Douglas R. Tait, Damien T. Maher, Paul Macklin, and Isaac R. Santos

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Automated, in situ measurements of dissolved CO2, CH4, and δ13C values using cavity enhanced laser absorption spectrometry: Comparing response times of air-water equilibrators, Jackie R. Webb, Damien T. Maher, and Isaac R. Santos

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Divergent drivers of carbon dioxide and methane dynamics in an agricultural coastal floodplain: post-flood hydrological and biological drivers, Jackie R. Webb, Isaac R. Santos, Douglas R. Tait, James Z. Sippo, Ben CT Macdonald, Barbara Robson, and Damien T. Maher

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Future aquafeeds may compromise reproductive fitness in a marine invertebrate, Camille A. White, Symon A. Dworjanyn, Peter D. Nichols, Benjamin Mos, and Tim Dempster

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Effects of alongshore morphology on groundwater flow and solute transport in a nearshore aquifer, Ying Zhang, Ling Li, Dirk V. Erler, Isaac Santos, and David Lockington

Papers from 2015

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Spatial and temporal variability of carbon dioxide and methane fluxes over semi-diurnal and spring–neap–spring timescales in a mangrove creek, Mitchell Call, Damien T. Maher, Isaac R. Santos, Sergio Ruiz-Halpern, Perrine Mangion, Christian J. Sanders, Dirk V. Erler, Joanne M. Oakes, R Rosentreter, and Bradley D. Eyre

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Drivers of carbon isotopic fractionation in a coral reef lagoon: predominance of demand over supply, Matheus Carvalho de Carvalho, Isaac R. Santos, Damien T. Maher, T Cyronak, A McMahon, Kai G. Schulz, and Bradley D. Eyre

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Production regime and associated N cycling in the vicinity of Kerguelen Island, Southern Ocean, A J. Cavagna, F Fripiat, M Elskens, Perrine Mangion, L Chirurgien, I Closset, M Lasbleiz, L Florez-Leiva, D Cardinal, K Leblanc, C Fernandez, D Lefèvre, L Oriol, S Blain, B Quéguiner, and F Dehairs

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What does impacted look like? high diversity and abundance of epibiota in modified estuaries, Graeme F. Clark, Brendan P. Kelaher, Katherine A. Dafforn, Melinda A. Coleman, Nathan A. Knott, Ezequiel M. Marzinelli, and Emma L. Johnston

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Functional traits reveal early responses in marine reserves following protection from fishing, Melinda Coleman, A E. Bates, R D. Stuart-Smith, H A. Malcolm, D Harasti, D Jordan, K A. Knott, G J. Edgar, and Brendan P. Kelaher

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Population dynamics of Turbo militaris (Gastropoda: Turbinidae) on rocky shores in a subtropical marine park: implications for management, Kris Cooling and Stephen DA Smith

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Extension of Dendronephthya australis soft corals in tidal current flows, Tom R. Davis, David Harasti, and Stephen DA Smith

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Applying cavity ring-down spectroscopy for the measurement of dissolved nitrous oxide concentrations and bulk nitrogen isotopic composition in aquatic systems: correcting for interferences and field application, Dirk V. Erler, T M. Duncan, R Murray, Damien T. Maher, Isaac R. Santos, J R. Gartland, P Mangion, and Bradley D. Eyre

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Abundance, site fidelity and range patterns of Indo-Pacific bottlenose dolphins (Tursiops aduncus) in two Australian subtropical estuaries, Christine Fury and Peter Lynton Harrison

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Putative predators of Carcinus Maenas in eastern Australia, C J. Garside, Melinda Coleman, Brendan P. Kelaher, and M J. Bishop

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Bioaccumulation of PCBs in liver tissue of dusky Carcharhinus obscurus, sandbar C. plumbeus and white Carcharodon carcharias sharks from south-eastern Australian waters, Jann M. Gilbert, Christine Baduel, Yan Li, Amanda J. Reichelt-Brushett, Paul A. Butcher, Shane P. McGrath, Victor M. Peddemors, Laurence Hearn, Jochen Mueller, and Leslie Christidis

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Metal and metalloid concentrations in the tissues of dusky Carcharhinus obscurus, sandbar C. plumbeus and white Carcharodon carcharias sharks from south-eastern Australian waters, and the implications for human consumption, Jann M. Gilbert, Amanda J. Reichelt-Brushett, Paul A. Butcher, Shane P. McGrath, Victor M. Peddemors, Alison C. Bowling, and Leslie Christidis

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Deep hooking and postrelease mortality of two Australian native freshwater fishes angled from rivers by using natural baits, Karina C. Hall, Matt K. Broadhurst, and Brian R. Cullis

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A preliminary study of the age and growth of Paddletail Snapper Lutjanus gibbus (Forsskål 1775) in Bunaken Marine Park, North Sulawesi, Indonesia, Ceylena J. Holloway, Daniel J. Bucher, and Lee Kearney

Comparisons of fish assemblages and grey nurse shark prey in and around the Cod Grounds Commonwealth Marine Reserve, Brendan Kelaher

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Strengthened enforcement enhances marine sanctuary performance, Brendan P. Kelaher, Andrew Page, Matt Dasey, Andrew Read, Alan Jordan, and Melinda Coleman

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Fur seal activity moderates the effects of an Australian marine sanctuary on temperate reef fish, Brendan P. Kelaher, Melissa Tan, Will F. Figueira, Bronwyn M. Gillanders, Sean D. Connell, Simon D. Goldsworthy, Natasha Hardy, and Melinda Coleman

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Biogenic acidification drives density-dependent growth of a calcifying invertebrate in culture, Benjamin Mos, Maria Byrne, Kenneth L. Cowden, and Symon A. Dworjanyn

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Biogenic acidification reduces sea urchin gonad growth and increases susceptibility of aquaculture to ocean acidification, Benjamin Mos, Marie Byrne, and Symon A. Dworjanyn

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Nitrous oxide and methane dynamics in a coral reef lagoon driven by pore water exchange: insights from automated high-frequency observations, Chiara O'Reilly, Isaac R. Santos, Tyler Cyronak, Ashley McMahon, and Damien T. Maher

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Groundwater seepage as a driver of CO2 evasion in a coastal lake (Lake Ainsworth, NSW, Australia), Anita Perkins, Isaac R. Santos, Mahmood Sadat-Noori, Jackie R. Gatland, and Damien T. Maher

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Photochemical efficiency and antioxidant capacity in relation to Symbiodinium genotype and host phenotype in a symbiotic cnidarian, S Pontasch, R Hill, Elisabeth S M Deschaseaux, PL Fisher, SK Davy, and Anna Scott

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Using compliance data to improve marine protected area management, Andrew D. Read, Ronald J. West, and Brendan P. Kelaher

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Biochar from commercially cultivated seaweed for soil amelioration, David A. Roberts, Nicholas A. Paul, Symon A. Dworjanyn, Michael I. Bird, and Rocky de Nys

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High CO2 evasion during floods in an Australian subtropical estuary downstream from a modified acidic floodplain wetland, Sergio Ruiz-Halpern, Damien T. Maher, Isaac R. Santos, and Bradley D. Eyre

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Arsenic fractionation in estuarine sediments: does coastal eutrophication influence as behavior?, Fabian Sá, Christian J. Sanders, Sambasiva R. Patchineelam, Eunice da Costa Machado, and Ana T. Lombardi

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Angling-induced barotrauma in snapper Chrysophrys auratus: are there consequences for reproduction?, Laura Sanchez-Peregrin, Paul A. Butcher, Matt K. Broadhurst, and Russell B. Millar

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Dissolved iron exports from an estuary surrounded by coastal wetlands: can small estuaries be a significant source of Fe to the ocean?, Christian J. Sanders, Isaac R. Santos, Damien T. Maher, Mahmood Sadat-Noori, Bernhard Schnetger, and Hans J Brumsack

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Porewater exchange as a driver of carbon dynamics across a terrestrial-marine transect: insights from coupled 222Rn and pCO2 observations in the German Wadden Sea, Isaac R. Santos, Melanie Beck, Hans-Jürgen Brumsack, Damien T. Maher, Thorsten Dittmar, Hannelore Waska, and Bernhard Schnetger

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Sediment variability affects fish community structure in unconsolidated habitats of a subtropical marine park, Arthur L. Schultz, Hamish A. Malcolm, Michellee Linklater, Alan R. Jordan, Tim Ingelton, and Stephen DA Smith

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Sediment contaminants and infauna associated with recreational boating structures in a multi-use marine park, Vivian X Y Sim, Katherine A. Dafforn, Emma L. Johnston, Stuart L. Simpson, and Brendan P. Kelaher

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The validation and measurement uncertainty of an automated gas chromatograph for marine studies of atmospheric dimethylsulfide, Hilton B. Swan, John P. Ivey, Graham B. Jones, and Bradley D. Eyre

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Size of catch, reproduction and feeding of the small-eye smooth-hound, Mustelus higmani (Carcharhiniformes: Triakidae), in Margarita Island, Venezuela, Alejandro Tagliafico, Iván Hernández-Ávila, Salomé Rangel, and Néstor Rago

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Biology of Rhizoprionodon lalandii (Elasmobranchii: Carcharhinidae) captured by the artisanal fishery of Margarita Island, Venezuela, Alejandro Tagliafico, Néstor Rago, Michelle Barany, and Salomé Rangel

Seasonal and diurnal dynamics of atmospheric radon, carbon dioxide, methane, δ13C-CO2 and δ13C-CH4 in a proposed Australian coal seam gas field, Douglas R. Tait, Damien T. Maher, and Isaac R. Santos

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Length-Weight Relationships of 22 commercial fish from Margarita Island, Venezuela, Alejandro Tragliafico, Nestor Rago, and M S. Rangel

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Larval phenotypic plasticity in the boom-and-bust crown-of-thorns seastar, Acanthaster planci, Kennedy Wolfe, Alexia Graba-Landry, Symon A. Dworjanyn, and Maria Byrne

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Larval starvation to satiation: influence of nutrient regime on the success of Acanthaster planci, Kennedy Wolfe, Alexia Graba-Landry, Symon A. Dworjanyn, and Maria Byrne

Papers from 2014

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Phytoplankton composition under contrasting oceanographic conditions: upwelling and downwelling (Eastern Australia), Linda H. Armbrecht, Moninya Roughan, Vincent Rossi, Amandine Schaeffer, Peter L. Davies, Anya M. Waite, and Leanne K. Armand

Country reports: Bonaire, Rolf Bak, Paul Hoetjes, Ayana Elizabeth Johnson, Ramon de Leon, Kalli de Meyer, Gabriel Grimsditch, Peter Lynton Harrison, Erik Meesters, Ivan Nagelkerken, Gerard Nieuwland, Maggy Nugues, Stuart Sandin, Sandin R. Scheffers, Brigitte Sommer, Bob Steneck, AGRRA, CARICOMP, and Reef Check

Adaptive management of temperate reefs to minimise effects of climate change: developing new effective approaches for ecological monitoring and predictive modelling, Neville Barrett, Amanda Bates, Maria Beger, Rick Stuart-Smith, Craig Syms, Neil Holbrook, Nathan Knott, David Booth, Brendan Kelaher, Stefan Howe, Colin Buxton, and Graham Edgar

Temporal variability of carbon and nutrient burial, sediment accretion, and mass accumulation over the past century in a carbonate platform mangrove forest of the Florida Everglades, Joshua L. Breithaupt, Joseph M. Smoak, Thomas J. Smith III, and Christian J. Sanders

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Drivers of pCO2 variability in two contrasting coral reef lagoons: the influence of submarine groundwater discharge, Tyler Cyronak, Isaac R. Santos, Dirk V. Erler, Damien T. Maher, and Bradley D. Eyre

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Enhanced acidification of global coral reefs driven by regional biogeochemical feedbacks, Tyler Cyronak, Kai G. Schulz, Isaac R. Santos, and Bradley D. Eyre

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Comparative response of DMS and DMSP concentrations in Symbiodinium clades C1 and D1 under thermal stress, Elisabeth S M Deschaseaux, V H. Beltran, Graham B. Jones, Myrna A. Deseo, Hilton B. Swan, Peter Lynton Harrison, and Bradley D. Eyre

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Effects of environmental factors on dimethylated sulfur compounds and their potential role in the antioxidant system of the coral holobiont, Elisabeth SM Deschaseaux, Graham B. Jones, Myrna A. Deseo, Kellie M. Shepherd, R P. Kiene, H B. Swan, Peter Lynton Harrison, and Bradley D. Eyre

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Dimethylsulphoxide (DMSO) in biological samples: a comparison of the TiCl3 and NaBH4 reduction methods using headspace analysis, E SM Deschaseaux, R P. Kiene, Graham B. Jones, Myrna A. Deseo, H B. Swan, L Oswald, and Bradley D. Eyre

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Implications of macroalgal isolation by distance for networks of marine protected areas, Halley MS Durrant, Christopher P. Burridge, Brendan P. Kelaher, Neville S. Barrett, Graham J. Edgar, and Melinda A. Coleman

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Corrigendum to Inorganic nitrogen transformations within permeable carbonate sands [Continental Shelf Research, vol. 77, doi:10.1016/j.csr.2014.02.002], Dirk V. Erler, Isaac R. Santos, and Bradley D. Eyre

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Inorganic nitrogen transformations within permeable carbonate sands, Dirk V. Erler, Isaac R. Santos, and Bradley D. Eyre

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Nitrogen transformations within a tropical subterranean estuary, Dirk V. Erler, Isaac R. Santos, Ying Zhang, Douglas R. Tait, Kevin M. Befus, Alicia Hidden, Ling Li, and Bradley D. Eyre

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The frequency of connection of coastal water bodies to the ocean predicts Carcinus maenas invasion, C J. Garside, T M. Glasby, M A. Coleman, Brendan P. Kelaher, and M J. Bishop

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Carbon dioxide and methane emissions from an artificially drained coastal wetland during a flood: Implications for wetland global warming potential, Jackie R. Gatland, Isaac R. Santos, Damien T. Maher, T M. Duncan, and Dirk V. Erler

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Hydrologic fragmentation-induced eutrophication in Dove Sound, Upper Florida Keys, USA, Thomas S. Harmon, Joseph M. Smoak, Matthew N. Waters, and Christian J. Sanders

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Evidence of taxon cycles in an Indo-Pacific passerine bird radiation (Aves: Pachycephala), Knud A. Jønsson, Martin Irestedt, Leslie Christidis, Sonya M. Clegg, Ben G. Holt, and Jon Fjeldså

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Larvae of the coral eating crown-of-thorns starfish, Acanthaster planci in a warmer-high CO2 ocean, Pamela Z. Kamya, Symon A. Dworjanyn, Natasha Hardy, Benjamin Mos, Sven Uthicke, and Maria Byrne

The ecology of Port Kembla Inner Harbour and Allans Creek, Brendan Kelaher

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Changes in fish assemblages following the establishment of a network of no-take marine reserves and partially-protected areas, Brendan P. Kelaher, Melinda A. Coleman, Alison Broad, Mathew J. Rees, Alan Jordan, and A R. Davis

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Enhancement of denitrification in permeable carbonate sediment due to intra-granular porosity: a multi-scale modelling analysis, Adam J. Kessler, M Bayani Cardenas, Isaac R. Santos, and Perran LM Cook

Estuarine canal estate waters: hotspots of CO2 outgassing driven by enhanced groundwater discharge?, Paul A. Macklin, Damien T. Maher, and Isaac R. Santos

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Methane and carbon dioxide dynamics in a subtropical estuary over a diel cycle: insights from automated in situ radioactive and stable isotope measurements, Damien T. Maher, Kirsten Cowley, Isaac R. Santos, Paul Macklin, and Bradley D. Eyre

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Mapping methane and carbon dioxide concentrations and δ13C values in the atmosphere of two Australian coal seam gas fields, Damien T. Maher, Isaac R. Santos, and Douglas R. Tait

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Importance of budgets for estimating the input of groundwater-derived nutrients to an eutrophic tidal river and estuary, Uriah Makings, Isaac R. Santos, Damien T. Maher, Lindsay Golsby-Smith, and Bradley D. Eyre

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Restoring seaweeds: does the declining fucoid Phyllospora comosa support different biodiversity than other habitats?, E M. Marzinelli, A H. Campbell, A Vergés, M A. Coleman, Brendan P. Kelaher, and P D. Steinberg

Cyclonic entrainment? The ichthyoplankton attributes of three major water mass types generated by the separation of the East Australian current, Paloma A. Matis, Will F. Figueira, Lain M. Suthers, Joshua Humphries, Anthony Miskiewicz, Ross A. Coleman, Brendan P. Kelaher, and Matthew D. Taylor

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Recent organic carbon accumulation (~100 years) along the Cabo Frio, Brazil upwelling region, Christian J. Sanders, Pedro P. Caldeira, Joseph M. Smoak, Michael E. Ketterer, Andre Belem, Ursula MN Mendoza, Livia GMS Cordeiro, Emmanoel V. Silva-Filho, Sambasiva R. Patchineelam, and Ana Luiza S Albuquerque

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Elevated rates of organic carbon, nitrogen, and phosphorus accumulation in a highly impacted mangrove wetland, Christian J. Sanders, Bradley D. Eyre, Isaac R. Santos, Wilson Machado, Wanilson Luiz-Silva, Joseph M. Smoak, Joshua L. Breithaupt, Michael E. Ketterer, Luciana Sanders, Humberto Marotta, and Emmanoel Silva-Fiho

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Influence of porewater exchange on nutrient dynamics in two New Zealand estuarine intertidal flats, Isaac R. Santos, Karin R. Bryan, Conrad A. Pilditch, and Douglas R. Tait

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Distribution of trace metals in stream sediments along the Trans-Amazonian Federal Highway, Para State, Brazil, Emmanoel V. Silva-Filho, Eduardo D. Marques, Monique Vilaça, Olga VO Gomes, Christian J. Sanders, and Vinicius T. Kutter

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The influence of groundwater inputs and age on nutrient dynamics in a coral reef lagoon, Douglas R. Tait, Dirk V. Erler, Isaac R. Santos, Tyler Cyronak, Uwe Morgenstern, and Bradley D. Eyre

Papers from 2013

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Carbon dioxide dynamics driven by groundwater discharge in a coastal floodplain creek, Marnie L. Atkins, Isaac R. Santos, Sergio Ruiz-Halpern, and Damien T. Maher

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Submarine groundwater discharge revealed by radium isotopes (Ra-223 and Ra-224) near a paleochannel on the Southern Brazilian continental shelf, Karina Kammer Attisano, Isaac R. Santos, Carlos Francisco Ferreira de Andrade, Mariele Lopes de Paiva, Idel Cristina Bigliardi Milani, and Luis Felipe Hax Niencheski

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Heat transport dynamics at a sandy intertidal zone, Kevin M. Befus, M B. Cardenas, Dirk V. Erler, Isaac R. Santos, and Bradley D. Eyre

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Groundwater and porewater as a major source of alkalinity to a fringing coral reef lagoon (Muri Lagoon, Cook Islands), Tyler Cyronak, Isaac R. Santos, Dirk V. Erler, and Bradley D. Eyre

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Permeable coral reef sediment dissolution driven by elevated pCO2 and pore water advection, Tyler Cyronak, Isaac R. Santos, and Bradley D. Eyre